BLAH2017

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    BLAH2017

    OFF AIR

    http://blah3.linkedannotation.org/program

    • 10:00 - 10:10 Opening remarks

      • Akiko Aizawa
    • 10:10 - 10:20 Introduction to BLAH3

      • Jin-Dong Kim
    • 10:20 - 11:10 Tying it all together - From terminology integration to annotation integration Keynote

      • Olivier Bodenreider
    • 11:10 - 11:30 Coffee Break

    • 11:30 - 11:40 BeCalm and keep BLAHing

      • Lars Juhl Jensen
    • 11:40 - 11:50 An overview of the MiNCor: annotation guidelines and text corpora for MicroRNA mentions in the scientific literature

      • Josè Camilla Sammartino, Martin Krallinger and Alfonso Valencia
    • 11:50 - 12:00 BioASQ and PubAnnotaion : Using linked annotations in biomedical question answering

      • *Anastasios Nentidis, Zi Yang, Mariana Neves, Jin-Dong Kim, Anastasia Krithara, George Paliouras and *Ioannis Kakadiaris
    • 12:00 - 12:10 Customized automatic corpus annotations using AlvisNLP/ML

      • Robert Bossy, Mouhamadou Ba and Claire Nédellec
    • 12:10 - 12:20 Towards seamless format conversion between BioC and PubAnnotation for sharing PubMed/PubMed Central documents and annotations

      • Sun Kim, Donald Comeau, Rezarta Islamaj Dogan and Zhiyong Lu
    • 12:20 - 12:30 The Noctua Modeling Tool

      • Seth Carbon
    • 12:30 - 14:00 Lunch

    • 14:00 - 14:50 Scientific Paper Analysis: JST CREST Project on Big Data Application Keynote

      • Yuji Matsumoto
    • 14:50 - 15:00 Linked Annotation Networks: Developing an Infrastructure for Inference

      • Tiffany J. Callahan and Lawrence E. Hunter
    • 15:00 - 15:10 Data programming for PubAnnotation via Snorkel

      • Juan Banda
    • 15:10 - 15:20 YBio M2CMT : a flexible bio-text mining tool for multi-component multi-target

      • Min Song, Sung Jeon Song, Yonghwan Kim, Kyu Bin Ahn and In Jun Baek
    • 15:20 - 15:30 Annotating the SIRO model and discovering experimental protocols

      • Olga Giraldo, Alexander Garcia, Tazro Ohta and Federico Lopez
    • 15:30 - 15:50 Coffee Break

    • 15:50 - 16:40 Integrating biomedical data annotation in scientific publishing Keynote

      • Thomas Lemberger
    • 16:40 - 16:50 Integrating PubTator in the curation pipeline of SourceData

      • Lou Götz, Nancy George, Sara El-Gebali, Anastasia Chasapi, Isaac Crespo, Ioannis Xenarios, Robin Liechti and Thomas Lemberger
    • 16:50 - 17:00 BioCreative 2017 PM task: finding mutations affecting protein interactions for precision medicine

      • Zhiyong Lu
    • 17:00 - 17:10 Building a cost-effective gold standard set for enriching PubAnnotation

      • Dongseop Kwon, Chih-Hsuan Wei, Sun Kim, Robert Leaman and Zhiyong Lu
    • 17:10 - 17:20 Extending the interoperability of tagtog and PubAnnotation

      • Juan Miguel Cejuela and Jorge Campos
    • 17:20 - 17:25 Closing

    :

    biohackathon

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    BLAH2017

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    LinkedData勉強会 6

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    NzRadio

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