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1,640 Live Views 11 In Crowd EBI-Roadshow
http://motdb.dbcls.jp/?EBI-Roadshow

Day 1: Access to Genes and Genomes with Ensembl (Jana Vandrovcova)

09:00 - 09:15 Welcome remarks from the organizers

09:15 - 09:45 Introduction to EBI: overview of most relevant databases… EBI-Roadshow
http://motdb.dbcls.jp/?EBI-Roadshow

Day 1: Access to Genes and Genomes with Ensembl (Jana Vandrovcova)

09:00 - 09:15 Welcome remarks from the organizers

09:15 - 09:45 Introduction to EBI: overview of most relevant databases (Lecture)

09:45 - 11:15 Origin, goals, data and analysis in the Ensembl project Website Walkthrough

11:15 - 11:30 Coffee Break

11:30 - 12:15 Ensembl exercises

12:15 - 13:15 Lunch

13:15 - 14:15 Retrieving datasets using the data mining tool BioMart (Lecture and exercises)

14:15 - 15:15 Comparative genomics and proteomics: orthologues, protein families, whole genome alignments and syntenic regions (Lecture and exercises)

15:15 - 15:30 Coffee break

15:30 - 16:30 Variations: Single nucleotide polymorphisms in Ensembl, comparison of strains, breeds, individuals using the browser and BioMart (Lecture and exercises)

16:30 - 17:15 Case Study Exercises, or browse your own gene or region


Day 2: Transcriptomics and Pathways (James Watson)

09:00 - 10:30 Functional Genomics resources at the EBI: ArrayExpress and Expression Atlas (Lecture)

10:30 - 10:45 Coffee break

10:45 - 12:30 ArrayExpress/Atlas exercises

12:30 - 13:30 Lunch

13:30 - 15:30 Reactome: a curated biological pathway database (Lecture and hands on)

15:30 - 15:45 Coffee break

15:45 - 17:00 More exercises & Questions More